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Published Papers

Featured Papers

Dominant atopy risk mutations identified by mouse forward genetic analysis
SoRelle, Jeffrey A et al. “Dominant atopy risk mutations identified by mouse forward genetic analysis.” Allergy vol. 76,4 (2021): 1095-1108. doi:10.1111/all.14564

A hypomorphic Mpi mutation unlocks an in vivo tool for studying global N-glycosylation deficiency
Lin, Elisa B et al. “A hypomorphic Mpi mutation unlocks an in vivo tool for studying global N-glycosylation deficiency.” JCI insight vol. 10,14 e180752. 22 Jul. 2025, doi:10.1172/jci.insight.180752

Multiplex Fragment Analysis for Flexible Detection of All SARS-CoV-2 Variants of Concern
Clark, Andrew E et al. “Multiplex Fragment Analysis for Flexible Detection of All SARS-CoV-2 Variants of Concern.” Clinical chemistry vol. 68,8 (2022): 1042-1052. doi:10.1093/clinchem/hvac081

All Papers

A hypomorphic Mpi mutation unlocks an in vivo tool for studying global N-glycosylation deficiency
Lin, Elisa B et al. “A hypomorphic Mpi mutation unlocks an in vivo tool for studying global N-glycosylation deficiency.” JCI insight vol. 10,14 e180752. 22 Jul. 2025, doi:10.1172/jci.insight.180752

Prevalence and species diversity of non-tuberculous mycobacteria in North Texas
Sah, Manoj K et al. “Prevalence and species diversity of non-tuberculous mycobacteria in North Texas.” Journal of infection and public health, vol. 18,10 102890. 5 Jul. 2025, doi:10.1016/j.jiph.2025.102890

N-glycosylation enzyme Mpi is essential for mucin O-glycosylation, host-microbe homeostasis, Paneth cell defense, and metabolism
Roy, Avishek et al. “N-glycosylation enzyme Mpi is essential for mucin O-glycosylation, host-microbe homeostasis, Paneth cell defense, and metabolism.” Research square rs.3.rs-6222474. 25 Mar. 2025, doi:10.21203/rs.3.rs-6222474/v1. Preprint.

Racial Differences in Systemic Immune Parameters in Individuals With Lung Cancer
von Itzstein, Mitchell S et al. “Racial Differences in Systemic Immune Parameters in Individuals With Lung Cancer.” JTO clinical and research reports vol. 6,1 100751. 19 Oct. 2024, doi:10.1016/j.jtocrr.2024.100751

Comprehensive Next Generation Sequencing Reveals that Purported Primary Squamous Cell Carcinomas of the Parotid Gland are Genetically Heterogeneous
Bishop, Justin A et al. “Comprehensive Next Generation Sequencing Reveals that Purported Primary Squamous Cell Carcinomas of the Parotid Gland are Genetically Heterogeneous.” Head and neck pathology vol. 18,1 106. 17 Oct. 2024, doi:10.1007/s12105-024-01714-6 

Disruption of the ZFP574-THAP12 complex suppresses B cell malignancies in mice
Zhong, Xue et al. “Disruption of the ZFP574-THAP12 complex suppresses B cell malignancies in mice.” Proceedings of the National Academy of Sciences of the United States of America vol. 121,31 (2024): e2409232121. doi:10.1073/pnas.2409232121

Variant reclassification and recontact research: A scoping review
Thummala, Abhinav et al. “Variant reclassification and recontact research: A scoping review.” Genetics in medicine open vol. 2 101867. 11 Jul. 2024, doi:10.1016/j.gimo.2024.101867

Differences in systemic immune parameters in individuals with lung cancer according to race
von Itzstein, Mitchell S et al. “Differences in systemic immune parameters in individuals with lung cancer according to race.” bioRxiv : the preprint server for biology 2024.06.07.597754. 10 Jun. 2024, doi:10.1101/2024.06.07.597754. Preprint.

Slice Testing-Considerations from Ordering to Reporting: A Joint Report of the Association for Molecular Pathology, College of American Pathologists, and National Society of Genetic Counselors
SoRelle, Jeffrey A et al. “Slice Testing-Considerations from Ordering to Reporting: A Joint Report of the Association for Molecular Pathology, College of American Pathologists, and National Society of Genetic Counselors.” The Journal of molecular diagnostics : JMD vol. 26,3 (2024): 159-167. doi:10.1016/j.jmoldx.2023.11.008

Essential role of MFSD1-GLMP-GIMAP5 in lymphocyte survival and liver homeostasis
Zhong, Xue et al. “Essential role of MFSD1-GLMP-GIMAP5 in lymphocyte survival and liver homeostasis.” Proceedings of the National Academy of Sciences of the United States of America vol. 120,50 (2023): e2314429120. doi:10.1073/pnas.2314429120

OVOL2 sustains postnatal thymic epithelial cell identity
Zhong, Xue et al. “OVOL2 sustains postnatal thymic epithelial cell identity.” Nature communications vol. 14,1 7786. 27 Nov. 2023, doi:10.1038/s41467-023-43456-z

Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation
Song, Ran et al. “Trans-Golgi protein TVP23B regulates host-microbe interactions via Paneth cell homeostasis and Goblet cell glycosylation.” Nature communications vol. 14,1 3652. 20 Jun. 2023, doi:10.1038/s41467-023-39398-1

β-catenin, Pax2, and Pten Panel Identifies Precancers Among Histologically Subdiagnostic Endometrial Lesions
Aguilar, Mitzi et al. “β-catenin, Pax2, and Pten Panel Identifies Precancers Among Histologically Subdiagnostic Endometrial Lesions.” The American journal of surgical pathology vol. 47,5 (2023): 618-629. doi:10.1097/PAS.0000000000002034

Predictors of mood or anxiety problems among transgender individuals seeking hormone therapy
Strenth, Chance R et al. “Predictors of mood or anxiety problems among transgender individuals seeking hormone therapy.” Family practice vol. 40,2 (2023): 273-281. doi:10.1093/fampra/cmac111

Endometrial Polyps-Are They Characterized by HMGA Rearrangements or Not? Reply to Bullerdiek et al
Koduru, Prasad et al. “Endometrial Polyps-Are They Characterized by HMGA Rearrangements or Not? Reply to Bullerdiek et al.” Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc vol. 36,2 (2023): 100058. doi:10.1016/j.modpat.2022.100058

Endometrial polyps are non-neoplastic but harbor epithelial mutations in endometrial cancer drivers at low allelic frequencies
Sahoo, Subhransu S et al. “Endometrial polyps are non-neoplastic but harbor epithelial mutations in endometrial cancer drivers at low allelic frequencies.” Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc vol. 35,11 (2022): 1702-1712. doi:10.1038/s41379-022-01124-5

Morules But Not Squamous Differentiation are a Reliable Indicator of CTNNB1 (β-catenin) Mutations in Endometrial Carcinoma and Precancers
Niu, Shuang et al. “Morules But Not Squamous Differentiation are a Reliable Indicator of CTNNB1 (β-catenin) Mutations in Endometrial Carcinoma and Precancers.” The American journal of surgical pathology vol. 46,10 (2022): 1447-1455. doi:10.1097/PAS.0000000000001934

SARS-CoV-2 coinfections with variant genomic lineages identified by multiplex fragment analysis
Lueking, Richard et al. “SARS-CoV-2 coinfections with variant genomic lineages identified by multiplex fragment analysis.” Frontiers in genetics vol. 13 942713. 26 Sep. 2022, doi:10.3389/fgene.2022.942713

Primary renal sarcoma with SS18::POU5F1 gene fusion
Argani, Pedram et al. “Primary renal sarcoma with SS18::POU5F1 gene fusion.” Genes, chromosomes & cancer vol. 61,9 (2022): 572-577. doi:10.1002/gcc.23053

Pancreatic Fibrosis Assessment Using Picosirius Red Staining in Chronic Pancreatitis Patients Undergoing Total Pancreatectomy with Islet Autotransplantation
Liu, Yang et al. “Pancreatic Fibrosis Assessment Using Picosirius Red Staining in Chronic Pancreatitis Patients Undergoing Total Pancreatectomy with Islet Autotransplantation.” Journal of gastrointestinal surgery : official journal of the Society for Surgery of the Alimentary Tractvol. 26,8 (2022): 1766-1768. doi:10.1007/s11605-022-05360-7

Multiplex Fragment Analysis for Flexible Detection of All SARS-CoV-2 Variants of Concern
Clark, Andrew E et al. “Multiplex Fragment Analysis for Flexible Detection of All SARS-CoV-2 Variants of Concern.” Clinical chemistry vol. 68,8 (2022): 1042-1052. doi:10.1093/clinchem/hvac081​

Loss of immunity-related GTPase GM4951 leads to nonalcoholic fatty liver disease without obesity
Zhang, Zhao et al. “Loss of immunity-related GTPase GM4951 leads to nonalcoholic fatty liver disease without obesity.” Nature communications vol. 13,1 4136. 16 Jul. 2022, doi:10.1038/s41467-022-31812-4

COVID-19 Vaccination is Associated With Favorable Outcomes Among Lung Transplant Patients With Breakthrough Infections
Bollineni, Srinivas et al. “COVID-19 Vaccination is Associated With Favorable Outcomes Among Lung Transplant Patients With Breakthrough Infections.” Transplantation proceedings vol. 54,6 (2022): 1517-1523. doi:10.1016/j.transproceed.2022.05.030

Ad interim recommendations for diagnosing SARS-CoV-2 infection by the IFCC SARS-CoV-2 variants working group
Lippi, Giuseppe et al. “Ad interim recommendations for diagnosing SARS-CoV-2 infection by the IFCC SARS-CoV-2 variants working group.” Clinical chemistry and laboratory medicine vol. 60,7 975-981. 22 Apr. 2022, doi:10.1515/cclm-2022-0345

COVID-19 Cases and Disease Severity in Pregnancy and Neonatal Positivity Associated With Delta (B.1.617.2) and Omicron (B.1.1.529) Variant Predominance
Adhikari, Emily H et al. “COVID-19 Cases and Disease Severity in Pregnancy and Neonatal Positivity Associated With Delta (B.1.617.2) and Omicron (B.1.1.529) Variant Predominance.” JAMA vol. 327,15 (2022): 1500-1502. doi:10.1001/jama.2022.4356

Increasing severity of COVID-19 in pregnancy with Delta (B.1.617.2) variant surge
Adhikari, Emily H et al. “Increasing severity of COVID-19 in pregnancy with Delta (B.1.617.2) variant surge.” American journal of obstetrics and gynecology vol. 226,1 (2022): 149-151. doi:10.1016/j.ajog.2021.09.008

The effect of the Covid-19 shutdown on glycemic testing and control
Sharma, Anu et al. “The effect of the Covid-19 shutdown on glycemic testing and control.” Clinica chimica acta; international journal of clinical chemistry vol. 519 (2021): 148-152. doi:10.1016/j.cca.2021.04.018

Thousands of induced germline mutations affecting immune cells identified by automated meiotic mapping coupled with machine learning
Xu, Darui et al. “Thousands of induced germline mutations affecting immune cells identified by automated meiotic mapping coupled with machine learning.” Proceedings of the National Academy of Sciences of the United States of America vol. 118,28 (2021): e2106786118. doi:10.1073/pnas.2106786118

Side-Effects of COVID-19 on Patient Care: An INR Story
Pearson, Lauren N et al. “Side-Effects of COVID-19 on Patient Care: An INR Story.” The journal of applied laboratory medicine vol. 6,4 (2021): 953-961. doi:10.1093/jalm/jfab025

Clinical Evaluation of the Abbott Alinity SARS-CoV-2 Spike-Specific Quantitative IgG and IgM Assays among Infected, Recovered, and Vaccinated Groups
Narasimhan, Madhusudhanan et al. “Clinical Evaluation of the Abbott Alinity SARS-CoV-2 Spike-Specific Quantitative IgG and IgM Assays among Infected, Recovered, and Vaccinated Groups.” Journal of clinical microbiology vol. 59,7 (2021): e0038821. doi:10.1128/JCM.00388-21

Digital Droplet PCR for SARS-CoV-2 Resolves Borderline Cases
Xu, Jing et al. “Digital Droplet PCR for SARS-CoV-2 Resolves Borderline Cases.” American journal of clinical pathology vol. 155,6 (2021): 815-822. doi:10.1093/ajcp/aqab041

Laboratory Action Plan for Emerging SARS-CoV-2 Variants
Filkins, Laura et al. “Laboratory Action Plan for Emerging SARS-CoV-2 Variants.” Clinical chemistryvol. 67,5 (2021): 720-723. doi:10.1093/clinchem/hvab020

Dynamic Impact of Hormone Therapy on Laboratory Values in Transgender Patients over Time
Allen, Amber N et al. “Dynamic Impact of Hormone Therapy on Laboratory Values in Transgender Patients over Time.” The journal of applied laboratory medicine vol. 6,1 (2021): 27-40. doi:10.1093/jalm/jfaa192

Mass Spectrometry for COVID-19
SoRelle, Jeffrey A et al. “Mass Spectrometry for COVID-19.” Clinical chemistry vol. 66,11 (2020): 1367-1368. doi:10.1093/clinchem/hvaa222

Saliva for use with a point of care assay for the rapid diagnosis of COVID-19
SoRelle, Jeffrey A et al. “Saliva for use with a point of care assay for the rapid diagnosis of COVID-19.” Clinica chimica acta; international journal of clinical chemistry vol. 510 (2020): 685-686. doi:10.1016/j.cca.2020.09.001

SARS-CoV-2 Antibody Responses Do Not Predict COVID-19 Disease Severity
Phipps, William S et al. “SARS-CoV-2 Antibody Responses Do Not Predict COVID-19 Disease Severity.” American journal of clinical pathology vol. 154,4 (2020): 459-465. doi:10.1093/ajcp/aqaa123

Clinical Validation of a SARS-CoV-2 Real-Time Reverse Transcription PCR Assay Targeting the Nucleocapsid Gene
SoRelle, Jeffrey A et al. “Clinical Validation of a SARS-CoV-2 Real-Time Reverse Transcription PCR Assay Targeting the Nucleocapsid Gene.” The journal of applied laboratory medicine vol. 5,5 (2020): 889-896. doi:10.1093/jalm/jfaa089

Assembling and Validating Bioinformatic Pipelines for Next-Generation Sequencing Clinical Assays
SoRelle, Jeffrey A et al. “Assembling and Validating Bioinformatic Pipelines for Next-Generation Sequencing Clinical Assays.” Archives of pathology & laboratory medicine vol. 144,9 (2020): 1118-1130. doi:10.5858/arpa.2019-0476-RA

Different Interpretations of the Same Genetic Data
SoRelle, Jeffrey A et al. “Different Interpretations of the Same Genetic Data.” Annals of internal medicinevol. 173,3 (2020): 239-240. doi:10.7326/L20-0192

Assessment of Interlaboratory Variation in the Interpretation of Genomic Test Results in Patients With Epilepsy
SoRelle, Jeffrey A et al. “Assessment of Interlaboratory Variation in the Interpretation of Genomic Test Results in Patients With Epilepsy.” JAMA network open vol. 3,4 e203812. 1 Apr. 2020, doi:10.1001/jamanetworkopen.2020.3812


Mutual inhibition between Prkd2 and Bcl6 controls T follicular helper cell differentiation

Misawa, Takuma et al. “Mutual inhibition between Prkd2 and Bcl6 controls T follicular helper cell differentiation.” Science immunology vol. 5,43 (2020): eaaz0085. doi:10.1126/sciimmunol.aaz0085

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Impact of Hormone Therapy on Laboratory Values in Transgender Patients

SoRelle, Jeffrey A et al. “Impact of Hormone Therapy on Laboratory Values in Transgender Patients.” Clinical chemistry vol. 65,1 (2019): 170-179. doi:10.1373/clinchem.2018.292730

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Clinical Utility of Reinterpreting Previously Reported Genomic Epilepsy Test Results for Pediatric Patients

SoRelle, Jeffrey A et al. “Clinical Utility of Reinterpreting Previously Reported Genomic Epilepsy Test Results for Pediatric Patients.” JAMA pediatricsvol. 173,1 (2019): e182302. doi:10.1001/jamapediatrics.2018.2302

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Intracellular lipid metabolism impairs β cell compensation during diet-induced obesity

Ye, Risheng et al. “Intracellular lipid metabolism impairs β cell compensation during diet-induced obesity.” The Journal of clinical investigation vol. 128,3 (2018): 1178-1189. doi:10.1172/JCI97702

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Comparison of surface modification chemistries in mouse, porcine, and human islets

SoRelle, Jeffrey A et al. “Comparison of surface modification chemistries in mouse, porcine, and human islets.” Journal of biomedical materials research. Part A vol. 103,3 (2015): 869-77. doi:10.1002/jbm.a.35229

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Alleviation of instant blood-mediated inflammatory reaction in autologous conditions through treatment of human islets with NF-κB inhibitors

Kanak, Mazhar A et al. “Alleviation of instant blood-mediated inflammatory reaction in autologous conditions through treatment of human islets with NF-κB inhibitors.” Transplantation vol. 98,5 (2014): 578-84. doi:10.1097/TP.0000000000000107

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Mycobacterium leprae and Mycobacterium haemophilum co-infection in an iatrogenically immunosuppressed patient

SoRelle, Jeffrey A et al. “Mycobacterium leprae and Mycobacterium haemophilum co-infection in an iatrogenically immunosuppressed patient.” Diagnostic microbiology and infectious disease vol. 78,4 (2014): 494-6. doi:10.1016/j.diagmicrobio.2013.09.003

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Improving allogeneic islet transplantation by suppressing Th17 and enhancing Treg with histone deacetylase inhibitors

Sugimoto, Koji et al. “Improving allogeneic islet transplantation by suppressing Th17 and enhancing Treg with histone deacetylase inhibitors.” Transplant international : official journal of the European Society for Organ Transplantation vol. 27,4 (2014): 408-15. doi:10.1111/tri.12265

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Withaferin A inhibits pro-inflammatory cytokine-induced damage to islets in culture and following transplantation

SoRelle, J A et al. “Withaferin A inhibits pro-inflammatory cytokine-induced damage to islets in culture and following transplantation.” Diabetologiavol. 56,4 (2013): 814-24. doi:10.1007/s00125-012-2813-9

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Safety and tolerability of the T-cell depletion protocol coupled with anakinra and etanercept for clinical islet cell transplantation

Takita, Morihito et al. “Safety and tolerability of the T-cell depletion protocol coupled with anakinra and etanercept for clinical islet cell transplantation.” Clinical transplantation vol. 26,5 (2012): E471-84. doi:10.1111/ctr.12011

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Improvement of collagenase distribution with the ductal preservation for human islet isolation

Shimoda, Masayuki et al. “Improvement of collagenase distribution with the ductal preservation for human islet isolation.” Islets vol. 4,2 (2012): 130-7. doi:10.4161/isl.19255

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Correlation of released HMGB1 levels with the degree of islet damage in mice and humans and with the outcomes of islet transplantation in mice

Itoh, Takeshi et al. “Correlation of released HMGB1 levels with the degree of islet damage in mice and humans and with the outcomes of islet transplantation in mice.” Cell transplantation vol. 21,7 (2012): 1371-81. doi:10.3727/096368912X640592

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Low temperature condition prevents hypoxia-induced islet cell damage and HMGB1 release in a mouse model

Itoh, Takeshi et al. “Low temperature condition prevents hypoxia-induced islet cell damage and HMGB1 release in a mouse model.” Cell transplantation vol. 21,7 (2012): 1361-70. doi:10.3727/096368912X637514

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Impact of tissue volume and purification on clinical autologous islet transplantation for the treatment of chronic pancreatitis

Matsumoto, Shinichi et al. “Impact of tissue volume and purification on clinical autologous islet transplantation for the treatment of chronic pancreatitis.” Cell transplantation vol. 21,4 (2012): 625-32. doi:10.3727/096368911X623899

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Insulin independence by supplemental islet transplantation 5 years after initial islet transplantation

​Matsumoto, Shinichi et al. “Insulin independence by supplemental islet transplantation 5 years after initial islet transplantation.” Journal of diabetes vol. 3,4 (2011): 353-5. doi:10.1111/j.1753-0407.2011.00146.x

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Association between the secretory unit of islet transplant objects index and satisfaction with insulin therapy among insulin-dependent islet recipients

Takita, M et al. “Association between the secretory unit of islet transplant objects index and satisfaction with insulin therapy among insulin-dependent islet recipients.” Transplantation proceedings vol. 43,9 (2011): 3250-5. doi:10.1016/j.transproceed.2011.10.029

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Usefulness of the secretory unit of islet transplant objects (SUITO) index for evaluation of clinical autologous islet transplantation

Matsumoto, S et al. “Usefulness of the secretory unit of islet transplant objects (SUITO) index for evaluation of clinical autologous islet transplantation.” Transplantation proceedings vol. 43,9 (2011): 3246-9. doi:10.1016/j.transproceed.2011.10.036

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An effective method to release human islets from surrounding acinar cells with agitation in high osmolality solution

Shimoda, M et al. “An effective method to release human islets from surrounding acinar cells with agitation in high osmolality solution.” Transplantation proceedings vol. 43,9 (2011): 3161-6. doi:10.1016/j.transproceed.2011.09.098

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High-mobility group box 1 expressions in hypoxia-induced damaged mouse islets

Itoh, T et al. “High-mobility group box 1 expressions in hypoxia-induced damaged mouse islets.” Transplantation proceedings vol. 43,9 (2011): 3156-60. doi:10.1016/j.transproceed.2011.09.100

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Cluster analysis of self-monitoring blood glucose assessments in clinical islet cell transplantation for type 1 diabetes

Takita, Morihito et al. “Cluster analysis of self-monitoring blood glucose assessments in clinical islet cell transplantation for type 1 diabetes.” Diabetes care vol. 34,8 (2011): 1799-803. doi:10.2337/dc10-1938

 

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UT Southwestern Affiliations​

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